CDS
| Accession Number | TCMCG051C42915 |
| gbkey | CDS |
| Protein Id | XP_024443957.1 |
| Location | join(824106..824276,824417..824575,824679..824824,824948..825321,825640..825755,826096..826227,826524..826739,826841..827053,827710..827799) |
| Gene | LOC7453709 |
| GeneID | 7453709 |
| Organism | Populus trichocarpa |
Protein
| Length | 538aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_024588189.1 |
| Definition | transcription initiation factor IIF subunit alpha isoform X2 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | Transcription initiation factor IIF subunit |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03021 [VIEW IN KEGG] |
| KEGG_ko |
ko:K03138
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03022
[VIEW IN KEGG] map03022 [VIEW IN KEGG] |
| GOs |
GO:0003674
[VIEW IN EMBL-EBI] GO:0005488 [VIEW IN EMBL-EBI] GO:0005515 [VIEW IN EMBL-EBI] GO:0008022 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGTCGTTCGATCTTCTGTTAAAGCCGTCGTGTAGCGGCTGCGGCAGCACCACAGATTTGTACGGAAGCAATTGCAAGCATATGACGCTTTGCTTGAATTGCGGCAAAACAATGGCGGAGAATCGCGGCAAATGCTTCGATTGTGGCACTACTGTCAGTCGCTTGATTCGAGAGTATAATGTTAGGGCGAGTACGAGTAGCGACAAGAATTATTTTATAGGAAGATTCGTGACAGGATTGCCGAGTTTTTCCAAGAAAAAAAATGCGGAAAATAAATGGTCTTTGCACAAAGAAGGAATCCTTGGTCGTCAGATTACTGATGCTTTGAGGGAGAAGTTTAAGAATAAGCCTTGGCTATTGGAGGATGAGACTGGGCAGTCTCAGTATCAGGGTCATCTTGAAGGGTCGCAATCGGCGACTTATTATCTGTTGATGATGACTGGGAAAGAGTTTGTTGCTATTCCTGCTGGTTCATGGTACAACTTTAACAAGGTAGCGCATTATAAGCAACTTACGTTGGAGGAAGCAGAGGAGAAGATGAAGAATAGGAGGAAGACTGCGGATGGGTATGAAAGGTGGATGATGAAAGCTGCAAATAATGGAGCTGCTGCATTTGGTGAGGTGGAGAAGGTAGATGATAAGGAGGGTGTTTCAGCTGGCGGGAGAGGTGGGCGTCGGAAAGCAAGTGGTGATGATGATGAGGGAAATGTGTCTGACAGGGGAGAGGAAGATGAAGAGGAGGAGGCAGGAAGGAAGAGTAGACTCGGACTCAATAAACAGGGTGGTGATGATGATGAAGAAGGTCCAAGAGGAGGTGATCTTGATATGGATGATGATGATATTGAGAAGGGTGATGATTGGGAGCATGAAGAAATTTTCACCGATGATGATGAAGCTGTCGCCATTGATCCTGAGGAACGGGAGGATTTGGCCCCAGAAGTTCCTGCTCCTCCCGAAATCAAGCAGGATGAAGATGATGAGGATGAGGAGAATGAGGAGGGAGGACTGAGTAAATCTGGGAAAGAGTTGAAGAAGCTACTAGGGAAAGCAAATGGTCTAAACGAGTCAGATGTAGAAGATGACGATGACGACGAGGATATGGATGATGATATTTCTCCGGTTCTGGCTCCAAAGCAGAAGGATGTTGTGCCGAAGGAGGAAGCTGCTGACATTAGTCCTGCAAAACCAACACCTTCAGGTTCTGCTAAGGGAACCCCTTCTACCTCCAAGTCTGCCAAGGGGAAAAGAAAATTGAATGGTGAAGATGCAAAATCTTCCAATGGTGCACCTGTGAAGAAGGTGAAGACAGAAAATGAAGTAAAACCTGCCGTGAAAGAAGAAAGCTCGCCTGCTACTAAAGGTACTGCAACTCCTAAAGTAACACCGCCATCATCAAAAACAGGGTCAACATCAGGTTCTACTGGTCCTGTCACTGAAGAAGAGATCAGGGCTGTTTTGTTGCAAAATGGGCCTGTTACCACACAGGATCTGGTTGCTAGGTTTAAATCACGACTAAGGACTCCTGAGGACAAGAAAGCTTTTGCAGATATTCTGAGGAGAATTTCTAAGATTCAAAAGACCAGTGGATCTAACTATGTTGTGCTGAGGGACAAATGA |
| Protein: MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVSRLIREYNVRASTSSDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGILGRQITDALREKFKNKPWLLEDETGQSQYQGHLEGSQSATYYLLMMTGKEFVAIPAGSWYNFNKVAHYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVSDRGEEDEEEEAGRKSRLGLNKQGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGKANGLNESDVEDDDDDEDMDDDISPVLAPKQKDVVPKEEAADISPAKPTPSGSAKGTPSTSKSAKGKRKLNGEDAKSSNGAPVKKVKTENEVKPAVKEESSPATKGTATPKVTPPSSKTGSTSGSTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVVLRDK |